|
|
|
Research Papers
Basic Sciences Division, Hutchinson Cancer Research Center, Seattle, Washington 98104.
Abstract
We purified xUBF on the basis of its ability to specifically bind the enhancer elements of the Xenopus laevis rRNA genes. xUBF also binds to both upstream and downstream regions of the X. laevis ribosomal gene promoter and is essential for polymerase I transcription. Unexpectedly, xUBF binds to both upstream and downstream regions of the human ribosomal gene promoter, producing footprints that are indistinguishable from the footprints produced by hUBF, a previously described polymerase I transcription factor isolated from human cells. Despite extensive sequence divergence of vertebrate polymerase I promoters, these data suggest an evolutionary conservation of the primary DNA-protein interaction.
This article has been cited by other articles:
![]() |
J. K. Friedrich, K. I. Panov, P. Cabart, J. Russell, and J. C. B. M. Zomerdijk TBP-TAF Complex SL1 Directs RNA Polymerase I Pre-initiation Complex Formation and Stabilizes Upstream Binding Factor at the rDNA Promoter J. Biol. Chem., August 19, 2005; 280(33): 29551 - 29558. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. Mais, J. E. Wright, J.-L. Prieto, S. L. Raggett, and B. McStay UBF-binding site arrays form pseudo-NORs and sequester the RNA polymerase I transcription machinery Genes & Dev., January 1, 2005; 19(1): 50 - 64. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. C. Valdez, D. Henning, R. B. So, J. Dixon, and M. J. Dixon The Treacher Collins syndrome (TCOF1) gene product is involved in ribosomal DNA gene transcription by interacting with upstream binding factor PNAS, July 20, 2004; 101(29): 10709 - 10714. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Liu, A. Guo, B. Boukhgalter, K. Van Den Heuvel, M. Tripp, and L. Pape Characterization of the fission yeast ribosomal DNA binding factor: components share homology with Upstream Activating Factor and with SWI/SNF subunits Nucleic Acids Res., December 15, 2002; 30(24): 5347 - 5359. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. A. Caudy and C. S. Pikaard Xenopus Ribosomal RNA Gene Intergenic Spacer Elements Conferring Transcriptional Enhancement and Nucleolar Dominance-like Competition in Oocytes J. Biol. Chem., August 23, 2002; 277(35): 31577 - 31584. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. M. Al-Khouri and M. R. Paule A Novel RNA Polymerase I Transcription Initiation Factor, TIF-IE, Commits rRNA Genes by Interaction with TIF-IB, Not by DNA Binding Mol. Cell. Biol., February 1, 2002; 22(3): 750 - 761. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. C. O'Sullivan, G. J. Sullivan, and B. McStay UBF Binding In Vivo Is Not Restricted to Regulatory Sequences within the Vertebrate Ribosomal DNA Repeat Mol. Cell. Biol., January 15, 2002; 22(2): 657 - 658. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. R. Paule and R. J. White SURVEY AND SUMMARY Transcription by RNA polymerases I and III Nucleic Acids Res., March 15, 2000; 28(6): 1283 - 1298. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Yamamoto, A. Koga, M. Yamamoto, Y.-i. Nishi, T.-a. Tamura, Y. Nogi, and M. Muramatsu Identification of a novel 70 kDa protein that binds to the core promoter element and is essential for ribosomal DNA transcription Nucleic Acids Res., March 1, 2000; 28(5): 1199 - 1205. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. F. Cavender, C. Mummert, and M. J. Tevethia Transactivation of a Ribosomal Gene by Simian Virus 40 Large-T Antigen Requires at Least Three Activities of the Protein J. Virol., January 1, 1999; 73(1): 214 - 224. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. B. Mougey, L. K. Pape, and B. Sollner-Webb Virtually the Entire Xenopus laevis rDNA Multikilobase Intergenic Spacer Serves to Stimulate Polymerase I Transcription J. Biol. Chem., October 25, 1996; 271(43): 27138 - 27145. [Abstract] [Full Text] [PDF] |
||||
![]() |
D A Keys, B S Lee, J A Dodd, T T Nguyen, L Vu, E Fantino, L M Burson, Y Nogi, and M Nomura Multiprotein transcription factor UAF interacts with the upstream element of the yeast RNA polymerase I promoter and forms a stable preinitiation complex. Genes & Dev., April 1, 1996; 10(7): 887 - 903. [Abstract] [PDF] |
||||
![]() |
C Cairns and B McStay Identification and cDNA cloning of a Xenopus nucleolar phosphoprotein, xNopp180, that is the homolog of the rat nucleolar protein Nopp140 J. Cell Sci., January 10, 1995; 108(10): 3339 - 3347. [Abstract] [PDF] |
||||
![]() |
D. Bazett-Jones, B Leblanc, M Herfort, and T Moss Short-range DNA looping by the Xenopus HMG-box transcription factor, xUBF Science, May 20, 1994; 264(5162): 1134 - 1137. [Abstract] [PDF] |
||||
![]() |
B A Purnell, P A Emanuel, and D S Gilmour TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes. Genes & Dev., April 1, 1994; 8(7): 830 - 842. [Abstract] [PDF] |
||||
![]() |
P Roussel, C Andre, C Masson, G Geraud, and D Hernandez-Verdun Localization of the RNA polymerase I transcription factor hUBF during the cell cycle J. Cell Sci., January 2, 1993; 104(2): 327 - 337. [Abstract] [PDF] |
||||
![]() |
R. M. Rodrigo, M. C. Rendon, J. Torreblanca, G. Garcia-Herdugo, and F. J. Moreno Characterization and immunolocalization of RNA polymerase I transcription factor UBF with anti-NOR serum in protozoa, higher plant and vertebrate cells J. Cell Sci., December 1, 1992; 103(4): 1053 - 1063. [Abstract] [PDF] |
||||
![]() |
H M Jantzen, A M Chow, D S King, and R Tjian Multiple domains of the RNA polymerase I activator hUBF interact with the TATA-binding protein complex hSL1 to mediate transcription. Genes & Dev., October 1, 1992; 6(10): 1950 - 1963. [Abstract] [PDF] |
||||
![]() |
B McStay, M W Frazier, and R H Reeder xUBF contains a novel dimerization domain essential for RNA polymerase I transcription. Genes & Dev., November 1, 1991; 5(11): 1957 - 1968. [Abstract] [PDF] |
||||
![]() |
B McStay and R H Reeder An RNA polymerase I termination site can stimulate the adjacent ribosomal gene promoter by two distinct mechanisms in Xenopus laevis. Genes & Dev., July 1, 1990; 4(7): 1240 - 1251. [Abstract] [PDF] |
||||
![]() |
S P Bell, H M Jantzen, and R Tjian Assembly of alternative multiprotein complexes directs rRNA promoter selectivity. Genes & Dev., June 1, 1990; 4(6): 943 - 954. [Abstract] [PDF] |
||||