Genes and Development

Home Help [Feedback] [For Subscribers] [Archive] [Search] [Contents]
 QUICK SEARCH:   [advanced]


     


GENES & DEVELOPMENT 7:844-856, 1993
ISSN 0890-9369
This Article
Right arrow Full Text (PDF)
Right arrow References
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Auble, D T
Right arrow Articles by Hahn, S
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Auble, D T
Right arrow Articles by Hahn, S
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

Research Papers

An ATP-dependent inhibitor of TBP binding to DNA.

D T Auble and S Hahn

Fred Hutchinson Cancer Research Center, Seattle, Washington 98104.

Abstract

An activity in yeast nuclear extracts (termed ADI) is described that inhibits the binding of the TATA-binding protein (TBP) to DNA in an ATP-dependent manner. The effect is reversible, ATP specific, rapid, and is not promoter specific. ADI is specific for TBP because three other protein-DNA complexes are not affected by ADI. The action of ADI is blocked by association of TFIIA with the TBP-DNA complex. ADI activity at the adenovirus major late promoter requires a segment of DNA upstream from the TATA sequence, suggesting that ADI recognizes aspects of both TBP and DNA. The evolutionarily conserved carboxy-terminal domain of TBP is sufficient for ADI recognition, and amino acids in the basic region of TBP are required for ADI action. ADI can repress transcription in vitro in an ATP-dependent manner. In the presence of ADI, both TFIIA and TBP are required to commit a template to transcription. A model of ADI action is proposed, and possible roles of ADI in the regulation of the transcription complex assembly are discussed.



Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us   Add to Digg Digg   Add to Reddit Reddit   Add to Technorati Technorati    What's this?


This article has been cited by other articles:


Home page
J. Biol. Chem.Home page
C. T. Archer, A. Delahodde, F. Gonzalez, S. A. Johnston, and T. Kodadek
Activation Domain-dependent Monoubiquitylation of Gal4 Protein Is Essential for Promoter Binding in Vivo
J. Biol. Chem., May 2, 2008; 283(18): 12614 - 12623.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
X. Zhao, H. Shi, A. Sevilimedu, N. Liachko, H. C. M. Nelson, and J. T. Lis
An RNA aptamer that interferes with the DNA binding of the HSF transcription activator
Nucleic Acids Res., August 7, 2006; 34(13): 3755 - 3761.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
V. Voronkova, N. Kacherovsky, C. Tachibana, D. Yu, and E. T. Young
Snf1-Dependent and Snf1-Independent Pathways of Constitutive ADH2 Expression in Saccharomyces cerevisiae
Genetics, April 1, 2006; 172(4): 2123 - 2138.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
A. A. Horwitz, S. Sankaran, and J. D. Parvin
Direct Stimulation of Transcription Initiation by BRCA1 Requires Both Its Amino and Carboxyl Termini
J. Biol. Chem., March 31, 2006; 281(13): 8317 - 8320.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
Z. Wang, G. M. Jones, and G. Prelich
Genetic Analysis Connects SLX5 and SLX8 to the SUMO Pathway in Saccharomyces cerevisiae
Genetics, March 1, 2006; 172(3): 1499 - 1509.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
D. Biswas, Y. Yu, D. Mitra, and D. J. Stillman
Genetic Interactions Between Nhp6 and Gcn5 With Mot1 and the Ccr4-Not Complex That Regulate Binding of TATA-Binding Protein in Saccharomyces cerevisiae
Genetics, February 1, 2006; 172(2): 837 - 849.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
K. Gulshan, S. A. Rovinsky, S. T. Coleman, and W. S. Moye-Rowley
Oxidant-specific Folding of Yap1p Regulates Both Transcriptional Activation and Nuclear Localization
J. Biol. Chem., December 9, 2005; 280(49): 40524 - 40533.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
M. P. Klejman, X. Zhao, F. M. A. van Schaik, W. Herr, and H. Th. M. Timmers
Mutational analysis of BTAF1-TBP interaction: BTAF1 can rescue DNA-binding defective TBP mutants
Nucleic Acids Res., September 22, 2005; 33(17): 5426 - 5436.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
J. V. Geisberg and K. Struhl
Quantitative sequential chromatin immunoprecipitation, a method for analyzing co-occupancy of proteins at genomic regions in vivo
Nucleic Acids Res., November 1, 2004; 32(19): e151 - e151.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. A. Pereira, M. P. Klejman, C. Ruhlmann, F. Kavelaars, M. Oulad-Abdelghani, H. Th. M. Timmers, and P. Schultz
Molecular Architecture of the Basal Transcription Factor B-TFIID
J. Biol. Chem., May 21, 2004; 279(21): 21802 - 21807.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
X. Fan, H. Shi, K. Adelman, and J. T. Lis
Probing TBP interactions in transcription initiation and reinitiation with RNA aptamers that act in distinct modes
PNAS, May 4, 2004; 101(18): 6934 - 6939.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
H. Kou, J. D. Irvin, K. L. Huisinga, M. Mitra, and B. F. Pugh
Structural and Functional Analysis of Mutations along the Crystallographic Dimer Interface of the Yeast TATA Binding Protein
Mol. Cell. Biol., May 1, 2003; 23(9): 3186 - 3201.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
R. P. Darst, A. Dasgupta, C. Zhu, J.-Y. Hsu, A. Vroom, T. Muldrow, and D. T. Auble
Mot1 Regulates the DNA Binding Activity of Free TATA-binding Protein in an ATP-dependent Manner
J. Biol. Chem., April 4, 2003; 278(15): 13216 - 13226.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
J. V. Geisberg, Z. Moqtaderi, L. Kuras, and K. Struhl
Mot1 Associates with Transcriptionally Active Promoters and Inhibits Association of NC2 in Saccharomyces cerevisiae
Mol. Cell. Biol., December 1, 2002; 22(23): 8122 - 8134.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
A. Dasgupta, R. P. Darst, K. J. Martin, C. A. Afshari, and D. T. Auble
Mot1 activates and represses transcription by direct, ATPase-dependent mechanisms
PNAS, March 5, 2002; 99(5): 2666 - 2671.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
J. R. Moll, A. Acharya, J. Gal, A. A. Mir, and C. Vinson
Magnesium is required for specific DNA binding of the CREB B-ZIP domain
Nucleic Acids Res., March 1, 2002; 30(5): 1240 - 1246.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
L. A. Pereira, J. A. van der Knaap, V. van den Boom, F. A. J. van den Heuvel, and H. T. M. Timmers
TAFII170 Interacts with the Concave Surface of TATA-Binding Protein To Inhibit Its DNA Binding Activity
Mol. Cell. Biol., November 1, 2001; 21(21): 7523 - 7534.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
S. M. Kraemer, R. T. Ranallo, R. C. Ogg, and L. A. Stargell
TFIIA Interacts with TFIID via Association with TATA-Binding Protein and TAF40
Mol. Cell. Biol., March 1, 2001; 21(5): 1737 - 1746.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
T. Oda, K. Kayukawa, H. Hagiwara, H. T. Yudate, Y. Masuho, Y. Murakami, T.-a. Tamura, and M.-a. Muramatsu
A Novel TATA-Binding Protein-Binding Protein, ABT1, Activates Basal Transcription and Has a Yeast Homolog That Is Essential for Growth
Mol. Cell. Biol., February 15, 2000; 20(4): 1407 - 1418.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
Q. Liu, S. E. Gabriel, K. L. Roinick, R. D. Ward, and K. M. Arndt
Analysis of TFIIA Function In Vivo: Evidence for a Role in TATA-Binding Protein Recruitment and Gene-Specific Activation
Mol. Cell. Biol., December 1, 1999; 19(12): 8673 - 8685.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
P. B. Komarnitsky, B. Michel, and S. Buratowski
TFIID-specific yeast TAF40 is essential for the majority of RNA polymerase II-mediated transcription in vivo
Genes & Dev., October 1, 1999; 13(19): 2484 - 2489.
[Abstract] [Full Text]


Home page
J. Biol. Chem.Home page
A. B. Upadhyaya, S. H. Lee, and J. DeJong
Identification of a General Transcription Factor TFIIAalpha /beta Homolog Selectively Expressed in Testis
J. Biol. Chem., June 18, 1999; 274(25): 18040 - 18048.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
T. A. Muldrow, A. M. Campbell, P. A. Weil, and D. T. Auble
MOT1 Can Activate Basal Transcription In Vitro by Regulating the Distribution of TATA Binding Protein between Promoter and Nonpromoter Sites
Mol. Cell. Biol., April 1, 1999; 19(4): 2835 - 2845.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. Sutrias-Grau, M. E. Bianchi, and J. Bernues
High Mobility Group Protein 1 Interacts Specifically with the Core Domain of Human TATA Box-binding Protein and Interferes with Transcription Factor IIB within the Pre-initiation Complex
J. Biol. Chem., January 15, 1999; 274(3): 1628 - 1634.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
D. T. Auble and S. M. Steggerda
Testing for DNA Tracking by MOT1, a SNF2/SWI2 Protein Family Member
Mol. Cell. Biol., January 1, 1999; 19(1): 412 - 423.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
J. A. Ranish, N. Yudkovsky, and S. Hahn
Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB
Genes & Dev., January 1, 1999; 13(1): 49 - 63.
[Abstract] [Full Text]


Home page
Microbiol. Mol. Biol. Rev.Home page
M. Hampsey
Molecular Genetics of the RNA Polymerase II General Transcriptional Machinery
Microbiol. Mol. Biol. Rev., June 1, 1998; 62(2): 465 - 503.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
I. Olave, D. Reinberg, and L. D. Vales
The mammalian transcriptional repressor RBP (CBF1) targets TFIID and TFIIA to prevent activated transcription
Genes & Dev., June 1, 1998; 12(11): 1621 - 1637.
[Abstract] [Full Text]


Home page
Genes Dev.Home page
T. I. Lee and R. A. Young
Regulation of gene expression by TBP-associated proteins
Genes & Dev., May 15, 1998; 12(10): 1398 - 1408.
[Full Text]


Home page
Mol. Cell. Biol.Home page
J. M. Madison, A. M. Dudley, and F. Winston
Identification and Analysis of Mot3, a Zinc Finger Protein That Binds to the Retrotransposon Ty Long Terminal Repeat (delta ) in Saccharomyces cerevisiae
Mol. Cell. Biol., April 1, 1998; 18(4): 1879 - 1890.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
J. J. Chicca II, D. T. Auble, and B. F. Pugh
Cloning and Biochemical Characterization of TAF-172, a Human Homolog of Yeast Mot1
Mol. Cell. Biol., March 1, 1998; 18(3): 1701 - 1710.
[Abstract] [Full Text]


Home page
Proc. Natl. Acad. Sci. USAHome page
E. L. Gadbois, D. M. Chao, J. C. Reese, M. R. Green, and R. A. Young
Functional antagonism between RNA polymerase II holoenzyme and global negative regulator NC2  in vivo
PNAS, April 1, 1997; 94(7): 3145 - 3150.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
S. Kim, J. G. Na, M. Hampsey, and D. Reinberg
The Dr1/DRAP1 heterodimer is a global repressor of transcription in vivo
PNAS, February 4, 1997; 94(3): 820 - 825.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
S. Roberts, S. J. Miller, W. S. Lane, S. Lee, and S. Hahn
Cloning and Functional Characterization of the Gene Encoding the TFIIIB90 Subunit of RNA Polymerase III Transcription Factor TFIIIB
J. Biol. Chem., June 21, 1996; 271(25): 14903 - 14909.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
E. R. Klebanow, D. Poon, S. Zhou, and P. A. Weil
Isolation and Characterization of TAF25, an Essential Yeast Gene That Encodes an RNA Polymerase II-specific TATA-binding Protein-associated Factor
J. Biol. Chem., June 7, 1996; 271(23): 13706 - 13715.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
F Mermelstein, K Yeung, J Cao, J A Inostroza, H Erdjument-Bromage, K Eagelson, D Landsman, P Levitt, P Tempst, and D Reinberg
Requirement of a corepressor for Dr1-mediated repression of transcription.
Genes & Dev., April 15, 1996; 10(8): 1033 - 1048.
[Abstract] [PDF]


Home page
Genes Dev.Home page
S Roberts, T Colbert, and S Hahn
TFIIIC determines RNA polymerase III specificity at the TATA-containing yeast U6 promoter.
Genes & Dev., April 1, 1995; 9(7): 832 - 842.
[Abstract] [PDF]


Home page
Genes Dev.Home page
J Ozer, P A Moore, A H Bolden, A Lee, C A Rosen, and P M Lieberman
Molecular cloning of the small (gamma) subunit of human TFIIA reveals functions critical for activated transcription.
Genes & Dev., October 1, 1994; 8(19): 2324 - 2335.
[Abstract] [PDF]


Home page
Genes Dev.Home page
X Sun, D Ma, M Sheldon, K Yeung, and D Reinberg
Reconstitution of human TFIIA activity from recombinant polypeptides: a role in TFIID-mediated transcription.
Genes & Dev., October 1, 1994; 8(19): 2336 - 2348.
[Abstract] [PDF]


Home page
Genes Dev.Home page
K C Yeung, J A Inostroza, F H Mermelstein, C Kannabiran, and D Reinberg
Structure-function analysis of the TBP-binding protein Dr1 reveals a mechanism for repression of class II gene transcription.
Genes & Dev., September 1, 1994; 8(17): 2097 - 2109.
[Abstract] [PDF]


Home page
Genes Dev.Home page
D T Auble, K E Hansen, C G Mueller, W S Lane, J Thorner, and S Hahn
Mot1, a global repressor of RNA polymerase II transcription, inhibits TBP binding to DNA by an ATP-dependent mechanism.
Genes & Dev., August 15, 1994; 8(16): 1920 - 1934.
[Abstract] [PDF]


Home page
Genes Dev.Home page
M A Collart and K Struhl
NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization.
Genes & Dev., March 1, 1994; 8(5): 525 - 537.
[Abstract] [PDF]


Home page
ScienceHome page
K Struhl
Duality of TBP, the universal transcription factor
Science, February 25, 1994; 263(5150): 1103 - 1104.
[PDF]


Home page
Genes Dev.Home page
D Ma, H Watanabe, F Mermelstein, A Admon, K Oguri, X Sun, T Wada, T Imai, T Shiroya, and D Reinberg
Isolation of a cDNA encoding the largest subunit of TFIIA reveals functions important for activated transcription.
Genes & Dev., November 1, 1993; 7(11): 2246 - 2257.
[Abstract] [PDF]


Home page
J. Biol. Chem.Home page
J. I. Adamkewicz, C. G. F. Mueller, K. E. Hansen, W. A. Prud'homme, and J. Thorner
Purification and Enzymic Properties of Mot1 ATPase, a Regulator of Basal Transcription in the Yeast Saccharomyces cerevisiae
J. Biol. Chem., July 7, 2000; 275(28): 21158 - 21168.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
A. Kobayashi, T. Miyake, Y. Ohyama, M. Kawaichi, and T. Kokubo
Mutations in the TATA-binding Protein, Affecting Transcriptional Activation, Show Synthetic Lethality with the TAF145 Gene Lacking the TAF N-terminal Domain in Saccharomyces cerevisiae
J. Biol. Chem., January 5, 2001; 276(1): 395 - 405.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
J. I. Adamkewicz, K. E. Hansen, W. A. Prud'homme, J. L. Davis, and J. Thorner
High Affinity Interaction of Yeast Transcriptional Regulator, Mot1, with TATA Box-binding Protein (TBP)
J. Biol. Chem., April 6, 2001; 276(15): 11883 - 11894.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
J. J. Stewart and L. A. Stargell
The Stability of the TFIIA-TBP-DNA Complex Is Dependent on the Sequence of the TATAAA Element
J. Biol. Chem., August 3, 2001; 276(32): 30078 - 30084.
[Abstract] [Full Text] [PDF]




Home Help [Feedback] [For Subscribers] [Archive] [Search] [Contents]
Genome Res. Learn. Mem.
Protein Science RNA Genes Dev.