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Vol. 16, No. 12, pp. 1498-1508, June 15, 2002
1 Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA; 2 Molecular and Cellular Biology Program, University of Washington, Seattle, Washington 98195, USA
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ABSTRACT |
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Previous studies of mitosis show that capture of single kinetochores by microtubules from both centrosomes (merotelic orientation) is a major cause of aneuploidy. We have characterized hcp-6, a temperature-sensitive chromosome segregation mutant in C. elegans that exhibits chromosomes attached to both poles via a single sister kinetochore. We demonstrate that the primary defect in this mutant is a failure to fully condense chromosomes during prophase. Although centromere formation and sister centromere resolution remain unaffected in hcp-6, the chromosomes lack the rigidity of wild-type chromosomes and twist around the long axis of the chromosome. As such, they are unable to establish a proper orientation at prometaphase, allowing individual kinetochores to be captured by microtubules from both poles. We therefore propose that chromosome rigidity plays an essential role in maintaining chromosome orientation to prevent merotelic capture.
[Key Words: C. elegans; centromere; kinetochore; chromosome condensation; bipolar attachment; aneuploidy]
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Introduction |
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The faithful segregation of chromosomes at mitosis is an
essential aspect of eukaryotic cell division.
Accurate segregation requires that the chromosomes achieve bipolar
attachment, such that one kinetochore is bound exclusively by
microtubules radiating from only one pole, while its sister kinetochore
is attached only to the opposing pole (for review, see Nicklas 1997
;
Rieder and Salmon 1998
). The capacity to attain this state is
established prior to nuclear envelope breakdown. It is during this time
that sister kinetochores form in a specific back-to-back orientation with the associated microtubule binding sites directed away from the
chromosome (Roos 1973
; Heneen 1975
; Moore and Roth 2001
). Owing to this
orientation, which is maintained by the natural rigidity of the
chromosome, capture of a kinetochore by one pole positions its sister
kinetochore such that it faces toward, and is thus likely to be
captured by, the opposing pole (Nicklas 1997
).
Nevertheless, this system is not error-free, as seen by recent work
that proposes that failures in bipolar attachment play a significant
role in generating aneuploidy in mammalian cells (Cimini et al. 2001
,
2002
). The authors are able to detect, at various points
following nuclear envelope breakdown, chromosomes attached to
microtubules from both poles via single kinetochores. Defects of this
nature are referred to as merotelically oriented chromosomes and lead
to lagging anaphase chromosomes. The occurrence of these chromosomes
can be enhanced by treatment with colcemid or nocodazole, which seem to
induce morphological changes in the kinetochore, making them appear
stretched or curled (Ladrach and LaFountain 1986
; Cimini et al. 2001
).
This suggests that alterations in kinetochore structure and flexibility
can prevent the establishment and maintenance of bipolar attachment.
However, the mechanism by which these maloriented chromosomes naturally
arise remains unclear.
In an effort to expand these observations, we have begun to investigate
how chromosome orientation is regulated in the nematode Caenorhabditis elegans. Our decision to work with this
organism is due in large part to its holocentric chromosomes, which
provide an increased capacity for cytological examination (Albertson
and Thomson 1982
; Pidoux and Allshire 2000
). Whereas the centromere of
monocentric organisms is present at a discrete region of the chromosome, and directs the assembly of a localized kinetochore, the
centromere of C. elegans assembles a holocentric kinetochore that extends the length of the chromosome. This magnified centromere provides a unique marker with which to examine the structure and orientation of not only the centromere, but of the mitotic chromosomes themselves. Components of the centromere and kinetochore have been
conserved throughout evolution, suggesting that the centromeres of
monocentric and holocentric organisms share functional similarity (Henikoff et al. 2000
; Pidoux and Allshire 2000
). Furthermore, detailed
structural analysis of mammalian centromeres indicates that these
structures are composed of discrete units brought together during
mitosis, a situation analogous to what is observed in C. elegans (Zinkowski et al. 1991
; Buchwitz et al. 1999
).
Because we are interested in understanding how chromosome orientation is established in mitosis, we began by examining a collection of chromosome segregation mutants to identify mutants with defects in this process. We present here the characterization of holocentric protein 6 (hcp-6), a temperature-sensitive mutant whose chromosomes become attached to both poles via a single sister kinetochore, identical to previous descriptions of merotelic chromosomes. This defect results from a partial failure in chromosome condensation, which does not affect centromere formation or resolution of sister centromeres, but causes hcp-6 chromosomes to be less rigid than wild-type chromosomes. This prohibits hcp-6 from establishing and maintaining proper chromosome orientation, resulting in a failure to achieve bipolar attachment and a dramatic chromosome segregation defect.
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Results |
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Isolation and cloning of hcp-6
We began to examine the underlying cellular mechanisms that establish chromosome orientation by first isolating mutants with an impaired ability to segregate chromosomes. To do so, we assembled a collection of 250 temperature-sensitive embryo-lethal mutants in C. elegans. Using 4`,6-diamidino-3-phenylindole dihydrochloride (DAPI) to visualize DNA, we identified 22 mutants in this collection that exhibited segregation defects following a shift to the nonpermissive temperature (26°C vs. 15°C). We chose one mutant, mr17, for further characterization, based on a drastic failure in chromosome segregation (Fig. 1, cf. A and B). Of particular interest were the anaphase phenotypes exhibited in this mutant, indicating a possible defect in chromosome orientation. These included extensive anaphase bridging and a high frequency of lagging chromosomes (Fig. 1, cf. D and E). Based on these results, we proceeded to clone the corresponding gene, which we eventually named holocentric protein 6 (hcp-6).
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Genetic analysis revealed that this locus was in the middle of
chromosome I, in the 0.35 m.u. region between dpy-5 and
unc-63 (see Materials and Methods). Transgenic rescue
experiments (Fig. 1F), in conjunction with sequence data obtained from
the C. elegans Sequencing Consortium, led us to focus our
attention on four candidate open reading frames (ORFs).
RNA-mediated interference (RNAi) (Fire et al. 1998
)
experiments revealed that only one of these, Y110A7A.1, generated a
phenocopy of the hcp-6(mr17) phenotype. RNAi with this ORF not
only produced approximately 100% embryo lethality, but DAPI staining
of RNAi embryos revealed chromosome segregation defects comparable to
hcp-6(mr17) (Fig. 1C). Previous RNAi analysis of this gene has
yielded similar phenotypes, namely embryo lethality and multinucleate
cells (Fraser et al. 2000
; Piano et al. 2000
).
To demonstrate ORF-specific rescue, we PCR-amplified the Y110A7A.1 ORF,
along with flanking genomic sequences, and used this DNA to generate
transgenic lines (Mello and Fire 1995
). Introduction of this sequence
into hcp-6(mr17) animals was sufficient to rescue the
temperature-sensitive embryo lethality (see Materials and Methods),
supporting the notion that the function of the Y110A7A.1 gene product
was disrupted in hcp-6(mr17). To confirm this identification, we sequenced the Y110A7A.1 gene from hcp-6(mr17) genomic DNA
and observed a single G to A transition at position 3073. This mutation lies within the predicted protein-coding region and converts glycine 1024 to glutamic acid. Based on these results we concluded that we had
identified the hcp-6 gene.
Y110A7A.1 is predicted to encode a protein of 1724 amino acids. BLAST
searches of protein sequence databases revealed that this gene product
contains a short stretch of sequence that is conserved among
XCAP-D2/CNAP1/Cnd1/YCS4 (Fig. 1G). These proteins are homologs of a
conserved subunit of the condensin complex, which has been shown to
play an important role in regulating mitotic chromosome condensation
and chromosome segregation (for review, see Koshland and Strunnikov
1996
; Hirano 2000
). For example, mutations in the mix-1 gene,
which encodes a core component of the condensin complex in C. elegans, generate a variety of mitotic defects, including lagging
chromosomes and aneuploidy (Lieb et al. 1998
). Similar phenotypes are
observed in other organisms following disruption of condensin function
(Saka et al. 1994
; Strunnikov et al. 1995
; Sutani et al. 1999
; Freeman
et al. 2000
; Schmiesing et al. 2000
; Bhalla et al. 2002
). However, the
exact mechanisms by which defects in chromosome condensation translate
into chromosome missegregation remain unclear.
HCP-6 localizes to the centromere
To determine the subcellular localization of this protein, we raised
a polyclonal antibody against HCP-6 (see Materials and Methods).
Immunofluorescence microscopy demonstrated that this antigen localizes
to the poleward faces of the metaphase plate, a pattern previously
shown to correspond with the holocentric centromere of C. elegans (Buchwitz et al. 1999
). To confirm that this protein is
present at the centromere, we performed a double staining experiment
with HCP-3, a centromeric histone H3-like protein (Buchwitz et al.
1999
). Although both of these proteins display a punctate staining
pattern in interphase, there was no detectable overlap between the two
(Fig. 2A-D). In contrast, examination of
prophase, metaphase, and anaphase chromosomes revealed that there was
nearly complete colocalization between these two proteins (Fig. 2E-P).
These results confirm that HCP-6 localizes to the C. elegans
centromere during mitosis. Due to this localization, we referred to
this gene as holocentric protein 6 (hcp-6).
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Having demonstrated that HCP-6 is present at the centromeres of mitotic
chromosomes, we were interested in examining whether this localization
would be maintained in the absence of a functional centromere. To
perform this experiment, we reduced HCP-3 expression with RNAi, and
stained the resulting embryos with anti-HCP-6 antibody. Although HCP-6
was present in the nucleus, it was not possible to detect parallel
lines of HCP-6 staining on condensed prophase chromosomes (Fig. 2Q-S).
Similar results were observed when expression of HCP-4, the C. elegans homolog of the mammalian CenP-C protein (Moore and Roth
2001
), was disrupted via RNAi (data not shown). Therefore, organization
of HCP-6 on chromosomes is dependent on proper centromere assembly.
After establishing the localization of HCP-6 in wild-type embryos, we were interested in determining whether this pattern was altered in hcp-6(mr17) embryos following a shift to the nonpermissive temperature (Fig. 3A-F). No discernible differences were detected during interphase (data not shown). However, as the chromosomes began to individualize and condense, in wild-type nuclei HCP-6 was concentrated on the chromosomes (Fig. 3G-I), whereas prophase staining in hcp-6(mr17) cells remained punctate and no association with chromosomes was detected (Fig. 3J-L). Furthermore, while HCP-6 was clearly present at the centromeres of metaphase chromosomes in wild-type cells (Fig. 3M-O), the protein was completely absent from metaphase plates in mutant embryos (Fig. 3P-R). The altered localization of HCP-6 in hcp-6(mr17) embryos at the nonpermissive temperature is consistent with this allele being a temperature-sensitive, loss-of-function mutation.
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Mitotic chromosomes fail to align properly in hcp-6
To examine whether the anaphase defects present in hcp-6
result from a failure in chromosome orientation, we set out to
establish a detailed description of the hcp-6 phenotype. In
particular, we wanted to investigate whether the defects seen in
hcp-6 are analogous to previous descriptions of merotelically
oriented chromosomes (Yu and Dawe 2000
; Cimini et al. 2001
, 2002
).
These reports demonstrate that lagging anaphase chromosomes often
consist of a sister chromatid with a single kinetochore that is
connected to microtubules from both poles. To test whether the lagging
chromosomes present in hcp-6 represent single chromatids, we
stained embryos with anti-HCP-3.
Because a shift to the restrictive temperature (26°C) generates such a severe anaphase phenotype, we performed a shift to a semipermissive temperature (23°C) to optimize our ability to observe single lagging chromosomes. Under these conditions, we were able to test the hypothesis that merotelically oriented chromosomes are generated in hcp-6. An examination of wild-type one-cell embryos demonstrated that lagging chromosomes were detectable in less than 1% of anaphases (n = 112). In contrast, 96% of anaphases (n = 92) in hcp-6 one-cell embryos displayed one or more lagging chromosome fragments, many of which appeared to interact with microtubules from both poles (Fig. 4A-D, inset in D). Furthermore, none of these chromosomal bodies displayed double lines of HCP-3 staining. Instead, the majority possessed a single line of reactivity (Fig. 4A, inset), consistent with the idea that they represent individual sister chromatids. The high frequency with which merotelic chromosomes are observed, even at a semipermissive temperature, suggests that they play a major role in generating the extreme aneuploidy seen in hcp-6.
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At this point, having shown that maloriented chromosomes are present in hcp-6, we sought to expand upon previous studies and investigate the mechanism(s) by which orientation defects can arise. We began to address this question by defining earlier points in mitosis where orientation defects could still be observed. We focused initially on metaphase, because defects in the maintenance of bipolar attachment would be particularly obvious at this stage of the cell cycle (Fig. 5G). In wild-type embryos, as has been previously described, staining with anti-HCP-3 revealed that this antigen is concentrated on the poleward faces of the metaphase plate (Fig. 5A-C). Although linear aggregates of HCP-3 staining are visible in hcp-6 metaphase plates, this reactivity is not distributed exclusively onto the poleward faces (Fig. 5D-F). Instead, individual centromeres can be seen running through the metaphase plate in an extremely disorganized fashion. Strikingly, it is possible to detect single centromeres traversing the entire width of the metaphase plate, potentially associating with both poles (Fig. 5E, see arrow). One model to explain this observed misalignment is that hcp-6 chromosomes lack the structural integrity of wild-type chromosomes, inhibiting their ability to orient properly.
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hcp-6 exhibits a defect in mitotic chromosome condensation
To evaluate the structure of mutant and wild-type chromosomes, we examined metaphase cells, when chromosomes are fully compacted (Fig. 6A-F). An inspection of hcp-6 metaphase plates (Fig. 6D-F) reveals that distinct chromosomal bodies are evident, indicating that a certain degree of condensation and individualization has been achieved (Fig. 6D). Nevertheless, the mutant chromosomes appear structurally different than the wild type. Most noticeably, they look much stringier and do not seem to have reached the level of condensation observed in the wild type. In another deviation from wild-type, viewing serial sections of metaphase plates shows that hcp-6 chromosomes are twisted such that sister centromeres no longer lie in a single plane (see Supplementary movie at http://www.genesdev.org). In the two-dimensional projections displayed in the figure, these twists are visible as gaps in centromeric staining (Fig. 6F), in contrast to the completely contiguous lines detectable in the wild type (Fig. 6C).
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These results indicate that the failure of hcp-6 chromosomes
to achieve bipolar attachment at metaphase is due to a partial defect
in chromosome condensation. Because this process represents one of the
earliest steps in mitosis, it raised the possibility that events
occurring prior to nuclear envelope breakdown play a critical role in
establishing and maintaining bipolar attachment. To investigate whether
hcp-6 displays defects in mitotic chromosome condensation
during prophase, we obtained a transgenic strain containing an
integrated copy of a GFP::histone H2B fusion construct (Praitis et al.
2001
). In this strain, DNA can be detected by a fluorescence microscope
within living embryos. Beginning at interphase (Fig. 6G,I), we
collected images every 45 sec until sister chromatid separation at
anaphase was achieved (data not shown). Once this sequence of images
was obtained, it was possible to go back and define the point of
maximal chromosome condensation, which occurs shortly before nuclear
envelope breakdown. In wild-type blastomeres, fully condensed
chromosomes are clearly evident (Fig. 6H), whereas mutant chromosomes
fail to achieve this level of compaction (Fig. 6J). One explanation for
how this prophase phenotype translates into the observed orientation
defects is that the partially decondensed hcp-6 chromosomes
lack the rigidity of wild-type chromosomes, allowing them to twist such
that a single centromere could become attached to both poles following
nuclear envelope breakdown.
hcp-6 chromosomes are more susceptible to twisting
To determine whether hcp-6 chromosomes exhibit an increased
frequency of twisting in prophase, we used HCP-3 staining as a marker
for chromosome orientation. It was also important to define a brief
period in prophase where we could better compare mutant and wild-type
chromosomes. To accomplish this, we costained with anti-HCP-1, a
component of the C. elegans kinetochore that assembles onto
mitotic chromosomes late in prophase (Moore et al. 1999
; data not
shown). In both wild-type and hcp-6, the majority of chromosomes displayed parallel lines of centromeric staining running the length of chromosome (Fig. 7A,F). A
small percentage of prophase chromosomes contained a single 180°
twist (Fig. 7B,C,G,H). This configuration was observed in 7% of the
wild-type chromosomes examined. An increased frequency of twisted
chromosomes (28%) was seen in hcp-6 (Fig. 7K). Furthermore,
4% of hcp-6 chromosomes (n = 47) display two or
more twists, patterns which are not detected in wild-type (Fig.
7D,E,I,J). These results support the proposed model that hcp-6
chromosomes lack the rigidity and structural integrity of wild-type
chromosomes at prophase. In turn, this allows single kinetochores to be
captured by both poles simultaneously, generating merotelically
oriented chromosomes and profound defects in mitotic chromosome segregation.
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Discussion |
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HCP-6 regulates chromosome condensation
This work centers on hcp-6, a mutant that was originally
identified because it failed to attain bipolar attachment. A more detailed characterization of the hcp-6 phenotype has
demonstrated that this gene plays an important role earlier in mitosis,
mediating chromosome condensation and establishing the rigidity of
mitotic chromosomes. However, it is essential to note that not all
aspects of chromosome condensation are abrogated in this mutant.
Although hcp-6 chromosomes are certainly less compact than
wild-type, they do individualize into distinct units. Similar
chromosome condensation phenotypes were described when components of
the C. elegans condensin complex were disrupted via RNAi
(Hagstrom et al. 2002
). Furthermore, centromere condensation and sister
centromere resolution appear normal in hcp-6 embryos. Finally,
several molecular markers for chromosome condensation, such as the
phosphorylation of Ser 10 on histone H3, remain unchanged in an
hcp-6 background (data not shown). These results indicate that
there are many factors involved in chromosome condensation, and that
disrupting the function of a gene like hcp-6 only affects
specific aspects of this process.
The centromeric localization of HCP-6 invites speculation about a
possible role for the centromere in mediating chromosome condensation.
Reports from other systems have demonstrated that several important
condensation factors seem to localize to the centromere (Rattner et al.
1996
; Torok et al. 1997
), and recent studies of C. elegans
have demonstrated that the two core components of the condensin complex
are present at the centromere (Hagstrom et al. 2002
). It will be
interesting to explore this question further and attempt to incorporate
these results into a more general model of chromosome condensation.
Finally, previous work on chromosome condensation has demonstrated that
disrupting this process in vivo leads to severe mitotic defects,
including anaphase bridging and chromosome missegregation (Uemura et
al. 1987
; Strunnikov et al. 1995
; Lieb et al. 1998
; Schmiesing et al.
1998
, 2000
; Sutani et al. 1999
; Freeman et al. 2000
; Bhalla et al.
2002
). Building on these observations, we present here the first
high-resolution cell biological description of a chromosome
condensation phenotype. These results provide a model to explain how
defects in condensation can lead to chromosome missegregation and aneuploidy.
HCP-6 is required to maintain chromosome rigidity and ensure accurate segregation
The earliest detectable defect in hcp-6 embryos is a
failure to properly condense chromosomes during prophase, resulting in less rigid chromosomes which are more susceptible to twisting. Following nuclear envelope breakdown, it is thus possible for hcp-6 chromosomes to become oriented such that a single
centromere is connected to both poles simultaneously. Despite this
failure to achieve bipolar attachment, these chromosomes are able to
congress towards the center of the cell, assemble onto the metaphase
plate, and begin to separate at anaphase (Khodjakov et al. 1997
).
However, these chromosomes fail to efficiently segregate into the
daughter cells. Instead, they remain suspended in the center of the
cell, or become stretched into chromatin bridges due to the strain of being pulled in two directions at once. Regardless, the end result is a
marked failure in chromosome segregation.
An essential aspect of this model is that the rigidity of condensed
wild-type chromosomes, although established earlier in mitosis, plays
an important role in setting up bipolar attachment at prometaphase. It
maintains the 180° opposition between sister centromeres, ensuring
that once a sister centromere becomes captured by a pole, the opposing
sister centromere will face the opposite pole (Roos 1973
; Heneen 1975
;
Moore and Roth 2001
). In addition, rigidity establishes the torsional
integrity of wild-type chromosomes and prevents them from twisting. In
wild-type cells, once a sister centromere is attached to a microtubule
via the kinetochore, the chromosome is oriented such that the entire
sister centromere is facing that pole (Rieder and Salmon 1998
). The
rigidity of wild-type chromosomes prevents them from twisting such that
a single centromere is facing both poles simultaneously (Nicklas 1997
).
The less condensed chromosomes present in hcp-6 do not display
any defects in centromere resolution, as seen by the back-to-back alignment maintained between their sister centromeres. However, their
reduced rigidity permits them to become torqued or twisted along the
long axis of the chromosome, such that a single centromere is oriented
towards both poles, allowing microtubules from both centrosomes to
capture a single sister chromatid.
The observation of merotelically oriented chromosomes in this mutant is
particularly interesting, because they were recently proposed to play a
major role in generating the aneuploidy seen in mammalian cells (Cimini
et al. 2001
, 2002
). However, one question that remains unaddressed in
these experiments is the mechanism by which merotelic chromosomes
naturally arise. They are observed with an increased frequency
following treatment with colcemid or nocadazole (Ladrach and LaFountain
1986
; Cimini et al. 2001
), which seem to bring about structural changes
in the kinetochores, causing them to adopt a curled, crescent-like
morphology and promoting merotelic attachment (Cimini et al. 2001
).
This observation is analogous to our results describing how the
decondensed chromosomes of hcp-6 are more flexible, which
leads to a failure in bipolar attachment. Based on this work, it seems
possible that disrupting aspects of chromosome condensation in
mammalian cells could promote the generation of merotelic chromosomes,
and perhaps initiate tumor progression. This suggestion is consistent
with the recent idea that defects in chromosome condensation may
contribute to the genomic instability associated with cancer (Sen
2000
). Our hope is that further examinations of the mechanisms of
chromosome missegregation in model systems such as C. elegans
will also provide valuable insights into important aspects of human biology.
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Materials and methods |
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C. elegans strains and culture conditions
The N2 Bristol strain was used as the wild-type background. The
following marker mutations were used, and are listed by chromosome: LGI
dpy-5(e61), unc-13(e450), unc-73(e936), unc-38(x20), unc-63(x18); LGII rol-6(e187); LGIII unc-32(e189); LGIV unc-5(e53); LGV dpy-11(e224); LGX lon-2(e678). The
integrated GFP::histone strain AZ212 unc-119(ed3) ruIs32[pAZ132: pie-1::GFP::histoneH2B] III was generated by
J. Austin as described by Praitis et al. (2001)
. The collection of
temperature-sensitive embryo lethal mutants was generated using methods
similar to those described by O'Connell et al. (1998)
. All
hcp-6(mr17) stocks were maintained at a permissive temperature
of 15°C and shifted to a restrictive temperature of 26°C for most
experiments. Strains were cultured on NGM plates with E. coli
OP50 as described by Brenner (1974)
.
Mapping and cloning of hcp-6
Initial mapping of hcp-6(mr17) demonstrated that it lies
in the gene cluster of LGI. Fine-scale genetic mapping to the interval between dpy-5 and unc-63 was performed as follows:
Progeny from hermaphrodites of genotype hcp-6/unc-63
dpy-5 were examined to identify Unc non-Dpy and Dpy non-Unc
recombinants. Five out of 73 Unc non-Dpy recombinants carried the
hcp-6(mr17) mutation, as did 68 of 77 Dpy non-Unc
recombinants. Transgenic rescue experiments were performed in one of
two ways. First, transgenic strains containing the YAC Y110A7 and a GFP
marker plasmid (pPD118.20, which was constructed by A. Fire,
Carnegie Institute, Baltimore, MD) were provided by Steve L'Hernault
(Emory University, Atlanta, GA). The hcp-6(mr17) mutation was
introduced into these strains using standard crosses. Second, exogenous
DNA was injected into the gonads of hcp-6(mr17) adults (Mello
and Fire 1995
). YAC and cosmid (Fig. 2) DNA was prepared and injected
at a concentration of 100ng/µL. A genomic clone of the entire
hcp-6 gene was generated by PCR amplification of a 7697 bp
sequence using the Elongase long-range PCR system (Gibco BRL) with the
primers 5'-TCAACCTCGATTGCTGGCTG-3' and 5'-CCTTCACAGC TCCTCCCATATC-3'.
This construct represents the 6048 bp of hcp-6 plus
approximately 1500bp of flanking genomic sequence. This construct was
injected at a concentration of 5 ng/µL, along with yeast genomic DNA
at a concentration of 80 ng/µL. In all cases, the dominant marker
rol-6 was coinjected with the test DNA at a concentration of 100 ng/µL. To assay for rescue, individual F2 Rol adults from stable
lines were shifted to 26°C and examined for their ability to
generationally amplify. When the single Y110A7A.1 ORF was injected,
four independent lines were obtained. On average, 10% of the adults
from these lines were able to found a viable population of worms (2/32,
3/32, 4/24, 2/22).
Sequencing of the Y110A7A.1 gene from the hcp-6(mr17) genome was accomplished by purifying genomic DNA from a homozygous population of hcp-6(mr17) worms. Both strands of the gene were sequenced using a number of hcp-6 primers. The mutation site was confirmed in three independent reactions.
RNA interference
We generated a template for the production of Y110A7A.1 double
stranded RNA as described by Moore et al. (1999)
. A 1000 bp sequence
representing a portion of exon 8 was amplified from wild-type genomic
DNA using the following primers: Sense 5'-gttggtcgaatggatgcaatg-3'; T7
sense 5'-GCGTAATAC GACTCACTATAGGGgttggtcgaatggatgcaatg-3'; Antisense
5'- ggattgcatctcgtaacataag-3'; T7 antisense
5'-GCGTAATACGA CTCACTATAGGGggattgcatctcgtaacataag-3'. dsRNA was
synthesized using T7 RNA polymerase and brought up in water to a final
concentration of 5mg/mL. This solution was injected into the syncytial
gonad of adult N2 worms. Injected worms were allowed to recover for 18 h before embryo viability was assayed or embryo slides were prepared.
hcp-3(RNAi) embryos were generated as described (Moore and
Roth 2001
).
Antibody preparation
A PCR fragment encoding amino acids 893-1247 of HCP-6 was cloned
into the pET28a vector (Novagen). The resulting 6X His tagged recombinant protein was purified over a nickel column according to the
manufacturer's instructions (QIAGEN). The purified protein was mixed
with Freund's adjuvant and used to immunize mice. Boosts were
performed every 2 wk, and serum was obtained after 6 wk. The sera was
affinity-purified against membrane-bound antigen (Harlow and Lane
1988
). The specificity of the antibody was demonstrated by three
different criteria: a complete inhibition of staining following
preincubation with the HCP-6 antigen, a significant decrease in the
staining of hcp-6(RNAi) embryos, and an alteration of the
staining pattern in hcp-6(mr17) embryos.
Antibody staining and microscopy
The N,N-dimethylformamide/methanol fixation and staining protocol
described by Moore et al. (1999)
was used for this work. The following
primary antibodies were used: anti-HCP-3 (Buchwitz et al. 1999
),
anti-HCP-1 (Moore et al. 1999
), and YL1/2, an anti-tubulin antibody
(Amersham Pharmacia Biotech). Staining was detected with AlexaFluor 594 and 488-conjugated secondary antibodies (Molecular Probes).
All images were gathered using a Deltavision multiple wavelength fluorescent microscope (Applied Precision). Stacks of 0.2 µm optical sections were collected for the indicated wavelengths and then deconvolved using Softworx software (Applied Precision). The figures displayed here are two-dimensional projections of multiple optical sections.
GFP microscopy
Wild-type and hcp-6(mr17) adults homozygous for the GFP::histone H2B transgene (see above) were shifted to 26°C for 1 h. They were then sliced open with a syringe needle, and one-cell embryos were collected using a mouth pipette. These embryos were placed on an agarose pad (1% agarose in M9 buffer) and examined under a Deltavision microscope. The microscope stage was heated to 26°C to maintain the proper temperature conditions. The one-cell embryos were examined until one began to undergo its first cleavage division, which generates the AB and P1 blastomeres. Immediately following this division, the progression of the AB nucleus through the cell cycle began to be filmed, with time points collected every 45 sec. For every time point, 20 0.2 µm optical sections were taken, to account for nuclear migration through the blastomere. In most cases, a complete round of the cycle (i.e., interphase to telophase) could be observed.
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Acknowledgments |
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We thank Sue Biggins, Brian Buchwitz, Jesse Goldmark, Landon Moore, and Todd Nystul for critical reading and help in preparing this manuscript. The mutant collection described here was generated by Mark Roth, Mike Morrisson, and Kevin Harris. Brian Buchwitz, Debbie Frank, Mike Morrisson, Landon Moore, and the authors all contributed to the screen itself. We are especially grateful to Barbara Page, Steve L'Hernault, and A.M. Rose for genetics advice and worm strains. Some of the strains used here were provided by the Caenorhabditis Genetics Center. J.S. was supported by NIH training grants T32GM07270 and T32CA09657. This work was supported by NIH grant R01GM48435-06 to M.B.R.
The publication costs of this article were defrayed in part by payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 USC section 1734 solely to indicate this fact.
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Footnotes |
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Received March 4, 2002; revised version accepted April 29, 2002.
3 Corresponding author.
E-MAIL mroth{at}fred.fhcrc.org; FAX (206) 667-6877.
Article and publication are at http://www.genesdev.org/cgi/doi/10.1101/gad.989102.
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